SIOG 223A

Geophysical Data Analysis - part 1


Winter 2020, Tues/Thurs 9-10:20am

IGPP Munk, 303

 

This web page documents the progress of SIOG223A, Geophysical Data Analysis, Part I, Winter 2020. It contains class notes, assignments, and datasets to be used for analysis. Click on the links below to download a pdf file of the notes.  SIOG223A is the first part of a 2- quarter course: Part 2 will be taught in Spring 2020. The outline is a reasonably accurate reflection of topics to be covered, but they may be revised and expanded as we go along. It is also likely that these topics will be taught in a somewhat different sequence from the chapter numbers given in the outline.

 

The goal of this class is to introduce you to fundamental methods for geophysical data analysis that will be useful in your research.  I expect that taking this class will require the average student to invest about 10 hours per week:  2 hours and 40 minutes of class time, 3 hours of reading, and 3-4 hours on homework. Depending on your background you may require much less or a bit more time.

 

Grades will be based on homework, typically about 6 or 7 sets distributed through the quarter, and occasional class presentation and discussions. I encourage you to discuss material with your colleagues, except for the final problem set which I usually ask students to complete without consultation. I don’t usually set specific office hours, but you are welcome to drop by and ask questions (IGPP Munk 329).  If everything seems too hard please ask for help sooner rather than later.

 

 

Lecture 1: 01/07/2020 –

Read the Course Outline PDF , and notes by Duncan Agnew entitled Graphical Rhetoric on Communicating  Your Results through Words, Equations, and Visualization. 

Outline PDF

Bibliography and suggestions for further reading throughout the class have also been posted.

Communicating  Your Results through Words, Equations, and Visualization,  aka Chapter 1, Graphical Rhetoric

Homework # 1 - Find and bring to next class one example of what you consider a highly informative graphic, along with your rationale for the choice. Read Chapters 1 and 1.

Slides from Lecture 1

 

Lecture 2: 01/09/2020

Discussion of Chapter 1, examples of data/results you have encountered and how to represent them.

Plus the second chapter 1 on Probability, Statistics, and Reality

Slides from Lecture 2

 

Lecture 3: 01/14/2020

We will discuss geomagnetic reversals and earthquake times as examples of stochastic processeses before moving on to Chapter 2 on Probability and Random Variables

Slides from Lecture 3

Homework#2 – due 1/23/2020

Lecture 4: 01/16/2020

From conditional probabilities to Bayes’ Theorem, Random variables, Density andDistribution Functions

Slides from Lecture 3 & 4

Lecture 5: 01/21/2020

Moving from RVs and PDFs to Conventional  Variables

Sums and functions of random variables

Characteristic functions and the central limit theorem

Slides from Lectures 5&6

Lecture 6: 01/23/2020

Homework#2is due today.

Chapter 3 provides a bestiary of univariate distributions, starting with uniform, Normal, exponential and Poisson distributions, then moving onto many others. This chapter also introduces pseudorandom numbers and the idea of using them to simulate random variables with a specified underlying pdf.

Homework#3 – due 1/30/2020 and uses California earthquake times

Lecture 7: 01/28/2020

Chapter 4 Multivariate random variables, correlation, propagating uncertainty, correlation, conditional and marginal distributions, covariance and correlation coefficients.

Lecture 8: 01/30/2020

Solutions to Homework #2 are here.  Today we will finish up Chapter 4 with a look at linear transformations of random variables, propagation of errors, revisit regression in the context of curve fitting. Next week we will move onto the business of parameter estimation discussed in Chapter 5.

Lectures 9 &10: 02/04/2020 and 02/06/2020

Read Chapter 5, pages 95-110 on estimates of location and scale, including method of moments,  order statistics (median and interquartile range), and trimmed estimates. Then move on to Monte Carlo methods and the idea of resampling to provide bootstrap estimates directly from the data. We finish Lecture 10 with a discussion of confidence limits or confidence intervals, and an example on how to find the confidence interval for the mean of normally distributed data when the variance is unknown, an application of the t-distribution introduced in Chapter 3.

Lectures 11 & 12: 02/11/2020 and 02/13/2020

This week we will complete Chapter 5, pages 110-124. Following a discussion of desirable properties for estimators (unbiased, efficient, and consistent) we’ll introduce the likelihood function and the method of maximum likelihood.

Homework#4 is now posted and is due 2/18/2020

As announced on 2/13, the due date for homework 4 has been revised to 2/20/20

Partial solutions to Homework 3 are here.

Lectures 13& 14: 02/18/2020, 02/20/2020

Statistical hypothesis testing is the topic of Chapter 6 in the notes.

Lecture 15: 02/25/2020

Least Squares Estimation is the topic of Chapter 7 in the notes.

Lecture 16: 02/27/2020

NLLS, adding a side constraint, penalized least squares

Supplementary notes  on Optimization by Bob Parker

Lecture 17: 03/03/2020

Total least squares and robust methods are briefly outlined in Chapter 8.

Lecture 18: 03/05/2020

Today’s lecture will be on non-parametric density function estimation.  For motivation we’ll start with an example of the application of the robust M-type methods described last time. A full description is given in this reference.  Notes on density estimation are in Chapter 9.

A PDF of lecture slides from Lectures 15-18 is available.

solutions to Homework 4 are here.

Homework # 5 is here, and due on March 18, 2020. Datasets for jcd.dat, and

old Faithful are available for download.

 

Lectures 19 & 20: 03/10/2020, 03/12/2020

We will complete the quarter with a brief introduction to Geophysical Modeling and Inverse Theory

 

 

 

 

 

 

 

 

 

Cathy Constable ( cconstable@ucsd.edu x43183, IGPP Munk Lab Room 329)